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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs113752431 chr6:24442787 C/T 2.44E-8 479 16.38 15.28 7.43 KM Plot
THCA rs1137807 chr10:7847802 C/T 7.56E-6 485 15.17 15.9 15.7 KM Plot
THCA rs113855394 chr14:59859472 T/C 0.000116 483 16.33 15 5.45 KM Plot
THCA rs113859536 chr4:39486892 A/G 5.33E-15 486 15.9 17.63 6.1 KM Plot
THCA rs113894298 chr6:26191943 G/GC 2.21E-8 490 15.63 16.8 4.75 KM Plot
THCA rs1139105 chr10:7847666 C/T 6.59E-6 487 15.17 15.9 15.7 KM Plot
THCA rs113922934 chr10:81819884 C/G 0.000253 489 16.2 15.9 11.73 KM Plot
THCA rs113933983 chr6:24414976 C/T 4.77E-15 489 16.38 14.85 11.07 KM Plot
THCA rs113939060 chr2:48067629 A/G 1.02E-7 488 15.48 17.93 8.27 KM Plot
THCA rs113966331 chr13:24889983 C/T 0.000171 477 15.08 17.83 17.08 KM Plot
THCA rs113971277 chr14:59689547 T/C 0 488 15.9 16.4 3.53 KM Plot
THCA rs113973959 chr10:104932062 G/A 6.44E-9 487 15.32 17.58 32.1 KM Plot
THCA rs114054696 chr10:7866269 A/G 3.83E-5 489 15.03 16.83 17.77 KM Plot
THCA rs11405600 chr1:200529409 G/GTT 3.3E-10 480 15.17 20.75 9.57 KM Plot
THCA rs11409456 chr4:3136695 C/CA 0.000253 482 17.13 14.47 14.73 KM Plot